I ran into this once. It has to do with the way notebooks sync with Amazon. I factory reset my device, and now my Scribe is offline only with WhisperSync disabled. I get my notebook pages in high resolution .png images from the hidden thumbnails folder via USB. There's no ridiculous watermark that way. Amazon doesn't get the opportunity to see or lose my data. I'm waiting for a jailbreak. I might create a Calibre plugin that will automatically download the notebook thumbnails, but it's super easy to do manually.
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